Publications
Objective 1.
To increase by 6-fold the content and bioavailability of Zn/Fe in cassava roots of a model cassava cultivar and demonstrate its viability in the field and efficacy in humans.Manary, M.J.
- Manary MJ, Hotz C, Krebs NF, Gibson RS, Westcott JE, Broadhead RL, Hambidge KM (2002) Zinc homeostasis in Malawian children on a high phytate maize-based diet. Am J Clin Nutr 75: 1057-1061.
Sayre, R.T.
- Rubinelli P, Siripornadulsil S, Gao-Rubinelli F and Sayre RT (2002) Cadmium and iron-stress inducible gene expression in the green alga Chlamydomonas reinhardtii: evidence for H43 protein function in iron assimilation. Planta 215: 1-13.
Schachtman, D.
- Ramesh, S., Shin, R., Eide, D.J. and Schachtman, D.P. (2003) Differential metal selectivity and gene expression of two zinc transporters from rice. Plant Physiology 133: 126-134.
Objective 2.
To increase by 4-fold the protein content of cassava roots of a model cassava cultivar and demonstrate its viability in the field and efficacy in humans.Fauquet, C. and Taylor, N.
- Speichinger, J., Taylor, N., Fauquet, C. and Chen, S. (2005). The cassava (Manihot esculenta Crantz) root proteome: protein identification and differential expression. Proteomics. In Press.
Manary, M.J.
Manary, MJ (2001) Protein - Energy Malnutrition: There is still work to do. J Pediatr Gastro Nutr 32: 519-520.
Manary MJ, Yarasheski KE, Smith S, Abrams ET, Hart CA (2004) Protein quantity, not protein quality, accelerates whole-body leucine kinetics and the acute phase response during acute infection in marasmic Malawaian children. Brit J Nutr. 92: 589-595.
Manary MJ, Yarasheski KE, Smith S, Abrams ET, Hart CA (2004) Protein quantity, not protein quality, accelerates whole-body leucine kinetics and the acute phase response during acute infection in marasmic Malawaian children. Brit J Nutr 92:589-595.
Manary MJ, Yarasheski KE, Smith S, Abrams ET, Hart CA (2004) Protein quantity, not protein quality, accelerates whole-body leucine kinetics and the acute phase response during acute infection in marasmic Malawaian children. Brit J Nutr 92:589-595.
Sayre, R.T.
- Siritunga D and Sayre, RT (2004) Engineering cyanogen synthesis and turnover in cassava (Manihot esculenta). Plant Molecular Biology 56: 661-669.
Zhang, P. and Gruissem, W.
Zhang P, Bohl-Zenger S, Puonti-Kaerlas J, Potrykus I and Gruissem W (2003) Two cassava promoters related to vascular expression and storage root formation. Planta 218, 192-203.
Zhang P, Jaynes JM, Potrykus I, Gruissem W and Puonti-Kaerlas J (2003) Transfer and expression of an artificial storage protein (ASP1) gene in cassava (Manihot esculenta Crantz). Transgenic Research 12, 243-250.
Zhang P, Jaynes JM, Potrykus I, Gruissem W and Puonti-Kaerlas J (2003) Transfer and expression of an artificial storage protein (ASP1) gene in cassava (Manihot esculenta Crantz): towards improving nutritive value of storage roots. In: Vasil I.K. (ed.) Plant Biotechnology 2002 and Beyond. Kluwer Academic Publishers, The Netherlands. Pages 425-427.
Objective 3.
To increase by 10-fold the vitamin A and E content of cassava roots of a model cassava cultivar and demonstrate its viability in the field and efficacy in humans.Cahoon, E.B.
Cahoon EB, Hall SE, Ripp KG, Ganzke TS, Hitz WD, Coughlan SJ (2003) Metabolic redesign of vitamin E biosynthesis in plants for tocotrienol production and increased antioxidant content. Nature Biotechnology 21: 1082-1087.
- Sattler SE, Cahoon EB, Coughlan SJ, DellaPenna D (2003) Characterization of tocopherol cyclases from higher plants and cyanobacteria. evolutionary implications for tocopherol synthesis and function. Plant Physiol. 132: 2184-2195.
Objective 4.
To decrease by 10-fold the cyanogen content in cassava roots of a model cassava cultivar and demonstrate its viability in the field.
Sayre, R.T. and Siritunga, D.
Mkpong OE, Yan H, Chism G and Sayre RT (1990) Purification, characterization and localization of linamarase in cassava.Plant Physiol. 93: 176-181.
McMahon J.M and Sayre RT (1993) Differential biosynthesis of linamarin in low and high cyanide cultivars of cassava. in: Proceedings of the First International Scientific Meeting of the Cassava Biotechnology Network; Roca, W.M. and Thro, A.M. eds., pgs. 376-378.
Arias-Garzon DI and Sayre RT (1993) Differential inhibition of transient gene expression in cassava root and leaf tissues. in: Proceedings of the First International Scientific Meeting of the Cassava Biotechnology Network; Roca, W.M. and Thro, A.M. eds., pgs. 239-243.
White WLB and Sayre RT (1993) Partial purification and characterization of hydroxynitrile lyase from cassava. in: Proceedings of the First International Scientific Meeting of the Cassava Biotechnology Network; Roca, W.M. and Thro, A.M. eds., pgs. 379-383.
Arias-Garzon DI and Sayre RT (1993) Tissue specific inhibition of transient gene expression in cassava (Manihot esculenta Crantz) tissues. Plant Science 93: 121-130.
White W, McMahon J and Sayre RT (1994) Regulation of cyanogenesis in cassava. Acta Horticulturae375: 69-77.
McMahon JM, White W, and Sayre RT (1995) Cyanogenesis in Cassava (Manihot esculenta Crantz). J. Exp. Bot. 46: 731-741.
McMahon J M and Sayre RT (1995) Cyanogenic glycosides: physiology and regulation of synthesis. In: Phytochemicals and Health, D.L. Gustine and H.E. Flores, eds. pgs 75-84.
White W and Sayre RT (1995) Characterization of hydroxynitrile lyase for the production of safe food products from cassava. In: Phytochemicals and Health, D.L. Gustine and H.E. Flores, eds. pgs 152-153.
Arias-Garzon DI, Sarria R, Gelvin S and Sayre RT (1995) New Agrobacterium tumefaciens plasmids for cassava transformation. in: Proceedings of the Second International Scientific Meeting of the Cassava Biotechnology Network; Roca, W.M. and Thro, A.M. eds., CIAT, Cali, Colombia, no. 150, pgs. 245-256.
McMahon JM and Sayre RT (1995) Regulation of cyanogenic potential in cassava (Manihot esculenta Crantz). in: Proceedings of the Second International Scientific Meeting of the Cassava Biotechnology Network; Roca, W.M. and Thro, A.M. eds. CIAT, Cali, Colombia, no. 150, pgs. 423-438.
McMahon J and Sayre RT (1997) Partial purification of the linamarin synthesizing enzyme complex from cassava. African J. Root Tuber Crops 2: 85-87.
White W, Arias-Garzon D, McMahon J and Sayre RT (1998) Cyanogenesis in cassava: The role of hydroxynitrile lyase in root cyanide production. Plant Physiology 116: 1219-1225.
Sayre RT (1998) Recent Advances in the Biochemistry and Molecular Biology of Cyanogenesis in Cassava. Proceedings of the 1st Latin American Conference on Tropical Root Crops, Sao Paulo, Brazil.
Arias-Garzon DI and Sayre RT (2000) Genetic engineering approaches to reducing the cyanide toxicity in cassava. (Manihot esculenta, Crantz).In: Cassava Biotechnology; IV International Scientific Meeting - CBN. Carvalho LJCB, Thro AM and Vilarinhos AD eds. Pgs. 213-221. Embrapa, Brasilia.
Siritunga D and Sayre RT (2003) Generation of cyanogen-free transgenic cassava. Planta 217: 367-373.
Siritunga D, Arias-Garzon D., White W and Sayre RT (2004) Over-expression of hydroxynitrile lyase in cassava roots accelerates cyanogenesis and detoxification. Plant Biotechnology Journal 2: 37-43.
Siritunga D and Sayre, RT (2004) Engineering cyanogen synthesis and turnover in cassava (Manihot esculenta). Plant Molecular Biology 56: 661-669.
- Msikita W, Ihemere U, Siritunga D and Sayre RT (2005) Cassava (Manihot esculenta Cranz) Transformation. In: Agrobacterium Protocols: Methods in Molecular Biology. vol. 44. Kan Wang, ed. Humana Press. (in press).
Objective 5.
To delay the rapid post-harvest physiological deterioration inherent to cassava roots of a model cultivar and demonstrate its viability in the field.Beeching, J.
Buschmann H, Reilly K, Rodriguez MX, Tohme J, Beeching JR. (2000) Hydrogen peroxide and flavan-3-ols in storage roots of cassava (Manihot esculenta Crantz) during postharvest deterioration. Journal of Agricultural and Food Chemistry. 48: 5522-5529.
Buschmann H, Rodriguez MX, Tohme J, Beeching JR. (2000) Accumulation of hydroxycoumarins during post-harvest deterioration of tuberous roots of cassava (Manihot esculenta Crantz). Annals of Botany. 86: 1153-1160.
Han Y, Gómez-Vásquez R, Reilly K, Li H, Tohme J, Cooper RM, Beeching JR. (2001) Hydroxyproline-rich glycoproteins expressed during stress responses in cassava. Euphytica. 120: 59-70.
Reilly K, Han Y, Tohme J, Beeching JR. (2001) Isolation and characterisation of a cassava catalase expressed during post-harvest physiological deterioration. Biochimica et Biophysica Acta. 1518: 317-323.
Cortés DF, Reilly K, Okogbenin E, Beeching JR, Iglesias C, Tohme J. (2002) Mapping genes implicated in post-harvest physiological deterioration in cassava (Manihot esculenta Crantz). Euphytica. 128: 47-53.
Reilly K, Gómez-Vásquez R, Buschmann, H, Tohme J, Beeching JR. (2003) Oxidative stress responses during cassava post-harvest physiological deterioration. Plant Molecular Biology 53: 669-685.
Gómez-Vásquez R, Day R, Buschmann H, Randles S, Beeching JR, Cooper RM. (2004) Phenylpropanoids, phenylalanine ammonia lyase and peroxidases in elicitor-challenged cassava (Manihot esculenta) suspension cells and leaves. Annals of Botany. 94: 87-97.
- Kemp BP, Beeching JR, Cooper RM. (2005) cDNA-AFLP reveals genes differentially expressed during the hypersensitive response of cassava. Molecular Plant Pathology. 6: 113-123.
Objective 6. To develop a model cassava cultivar with high levels of resistance to CMD and demonstrate its resistance in the field.
Fauquet, C. and Taylor, N.Fregene, M. and Ceballos, H.
Masona, M.V., Taylor, N.J., Robertson, A.I. and Fauquet, C.M. (2001). Transferring a cassava (Manihot esculenta Crantz) genetic engineering capability to the African environment: Progress and prospects. Euphytica, 120: 43-48.
Ndjiondjop, M.N., Brugidou, C., Zang, S., Fargette, D., Ghesquiere, A. and Fauquet, C.M. (2001). High resistance to rice yellow mottle virus in two cultivated rice cultivars is correlated with failure of cell to cell movement. Physiological and Molecular Plant Pathology, 59: 309-316.
Pita, J.S., Fondong, V.N., Sangaré, A., Kokora, R.N.N. and Fauquet, C.M. (2001). Genomic and biological diversity of the African cassava geminiviruses. Euphytica, 120: 115-125.
Pita, J.S., Fondong, V.N., Sangaré, A., Otim-Nape, G.W., Ogwal, S. and Fauquet, C.M. (2001). Recombination, pseudorecombination and synergism of geminiviruses are determinant keys to the epidemic of severe cassava mosaic disease in Uganda. Journal of General Virology, 82: 655-665.
Taylor, N.J., Masona, M.V., Carcamo, R., Ho, T., Schôpke, C. and Fauquet, C.M. (2001). Production of embryogenic tissues and regeneration of transgenic plants in cassava (Manihot esculenta Crantz). Euphytica, 120: 25-34.
Fauquet, C.M. (2001). Viral Classification and Nomenclature. In: Encyclopedia of Life Sciences. London: Nature Publishing Group. [doi: 10.1038/npg.els.0000440] http://www.els.net/
Fofana, I.B.F., Sangaré, A., Ndunguru, J., Kahn, K. and Fauquet, C.M. (2003). Principles for control of virus diseases in developing countries. In Gad Loebenstein and George Thottapilly (Eds.), Virus and virus-like diseases of major crops in developing countries: Kluwer Academic, Dordrecht, The Netherlands.
Fauquet, C.M., Ceballos, H., and Zhang, P. (Eds.)(2004). Special Cassava Issue. Plant Molecular Biology.
Fauquet, C.M. (2004). Family Geminiviridae. In Lapierre, H. and Signoret, P.-A. (Eds.), Viruses and virus diseases of Poaceae (Gramineae). INRA Editions, Versailles, France.
Fauquet, C.M. (2004). Viral classification and nomenclature. In: Encyclopedia of Life Sciences. London: Nature Publishing Group. [doi: 10.1038/npg.els.0000440] http://www.els.net/
Chellappan, P., Masona, M.V., Vanitharani, R., Taylor, N.J. and Fauquet, C.M. (2004). Broad spectrum resistance to ssDNA viruses associated with transgene-induced gene silencing in cassava. Plant Molecular Biology. 56: 601-611.
Fauquet, C.M. and Tohme, J. (2004). The Global Cassava Partnership for Genetic Improvement. Plant Molecular Biology. 56:V-X.
Fofana, I.B.F., Sangare, A., Collier, R., Taylor, C. and Fauquet, C.M. (2004). A geminivirus-induced gene silencing system for gene function validation in cassava. Plant Molecular Biology. 56: 613-624.
Legg, J.P. and Fauquet, C.M. (2004). Cassava mosaic geminiviruses in Africa. Plant Molecular Biology. 56:585-599.
Taylor, N.J., Kent, L. and Fauquet, C.M. (2004). Progress and challenges for the deployment of transgenic technologies in cassava. AgBioForum. 7: article 10.
Vanitharani, R., Chellappan, P., Pita, J. and Fauquet, C.M. (2004). Differential roles of AC2 and AC4 of cassava geminiviruses in mediating synergism and post-transcriptional gene silencing suppression. Journal of Virology 78: 9487-9498.
Fauquet, C.M., Mayo, M.A., Maniloff, J., Desselberger, U. and Ball, L.A. (Eds.)(2005). Virus Taxonomy, VIIIth Report of the ICTV. Elsevier/Academic Press, London, pp. 1258.
Vanitharani, R., Chellappan, P. and Fauquet, C.M. (2005). RNAi and gene silencing phenomena mediated by viral suppressors in plants. In Krishnarao Appasani (Ed.), RNA Interference Technology: From Basic Science to Drug Development. Cambridge University, Cambridge, UK.
Yadav, J.S., Fauquet, C.M. and Beachy, R.N. (2005). Control of plant virus diseases. In Robert M. Goodman (Ed.), Encyclopedia of Plant and Crop Science. Marcel Dekker, New York. Accepted.
Ndunguru, J., Legg, J.P., Thompson, G., Aveling, T. and Fauquet, C.M. (2005). Molecular biodiversity of cassava begomoviruses in Tanzania: evolution of cassava geminiviruses in Africa and evidence for East Africa.being a center of diversity of cassava geminiviruses. Virology Journal. 2:21. doi:10.1186/1743-422X-2-21.
Ndunguru, J., Legg, J.P., Aveling, T., Thompson, G. and Fauquet, C.M. (2005). Restriction and sequence analysis of PCR-Amplified viral DNAs suggests the existence of different cassava mosaic disease in Tanzania. AAB. In Press
Ndunguru, J., Legg, J.P., Fofana, B., Aveling, T., Thompson, G. and Fauquet, C.M. (2005). First report of a naturally occurring defective interfering molecule of East African Cassava Mosaic Virus. Archives of Virology. In Press.
Ndunguru, J., Fofana, I.B.F., Legg, J.P., Chellappan, P., Pita, J.S., Taylor, N.J., Thompson, G., Aveling, T. and Fauquet, C.M. (2006). Two novel satellite DNA molecules associated with bipartite cassava mosaic begomoviruses enhance symptoms and break resistance in cassava germplasm. Virology. Submitted.
Marmey, P. and Fauquet, C.M. (2006). CMI/AAB Description of Plant Viruses – Cassava vein mosaic virus. Submitted.
Fregene M. , Okogbenin E., Marin J., Moreno I., Ariyo O., Akinwale O., Barrera E., Ceballos H., and Dixon A. (2006). Molecular Marker Assisted Selection (MAS) of Resistance to the Cassava Mosaic Disease (CMD). Euphytica (in press)
3. Elizabeth Balyejusa Kizito, Anton Bua, Martin Fregene, Thomas Egwang, Urban Gullberg and Anna Westerbergh (2005). The effect of cassava mosaic disease on the genetic diversity of cassava in Uganda Euphytica 146:45-54
Fregene M., Matsumura H., Akano A., Dixon A., Terauchi R. (2004). Serial Analysis of Gene Expression (SAGE) of Host Plant Resistance to the Cassava Mosaic Disease Resistance (CMD) Plant Molecular Biology 56:563-571.
Fregene M., and Mba C. (2004). Marker-Assisted Selection (MAS). In: Hershey C. (ed). Cassava Breeding. FAO, Via Caravelle, Rome, Italy
Taylor, N., Mkumbira J., Lokko Y., Fregene M., Fauquet C. (2004) Progress in Understanding, Generating and Deploying Resistance to Cassava Mosaic Disease. Agronomy Review (In press)
Tomkins J., Fregene M., Main D., Kim H., Wing R., and Tohme J. (2004). Bacterial Artificial Chromosome (BAC) Library Resources for Positional Cloning of Pest and Disease Resistance Genes in Cassava (Manihot esculenta Crantz). Plant Molecular Biology 56: 555-561
Akano A., Barrera E., Dixon A.G.O., Fregene M. (2002). Molecular Genetic Mapping of Resistance to the African Cassava Mosaic Disease. Theor and Appl Genet 105:521-525.
Fregene M.A., Bernal A., Dixon A., Roca W., and Tohme J.. (2000). AFLP analysis of African cassava (manihot esculenta crantz) germplasm resistant to the cassava mosaic disease (CMD). Theor and Appl Genet. 100:678-685
Zhang and Gruissem
Zhang P, Vanderschuren H, Fütterer J and Gruissem W (2005) Resistance to cassava mosaic disease in transgenic cassava expressing antisense RNAs targeting virus replication genes. Plant Biotechnology Journal 3, 385-397.
Akbergenov R, Si-Ammour A, Blevins T, Amin I, Kutter C, Vanderschuren H, Zhang P, Gruissem W, Meins F Jr, Hohn T, Pooggin MM (2006) Molecular characterization of geminivirus-derived small RNAs in different plant species. Nucleic Acids Research 34(2), 462-471
Other Related Publications
Cahoon, E.B.
Cahoon EB, Shanklin J (2000) Substrate-dependent mutant complementation to select fatty acid desaturase variants for metabolic engineering of plant seed oils. Proc. Natl. Acad. Sci. USA 97: 12350-12355.
Cahoon EB, Marrillia EF, Stecca KL, Hall SE, Taylor DC, Kinney AJ (2000) Production of fatty acid components of meadowfoam oil in somatic soybean embryos. Plant Physiol. 124: 243-251.
Cahoon EB, Ripp KG, Hall SE, Kinney AJ (2001) Formation of conjugated D8, D10 double bonds by D12-oleic acid desaturase related enzymes: biosynthetic origin of calendic acid. J. Biol. Chem. 276: 2637-2643.
Mekhedov S, Cahoon EB, Ohlrogge J (2001) An unusual seed‑specific 3‑ketoacyl‑ACP synthase associated with the synthesis of petroselinic acid. Plant Mol. Biol. 47:507‑518
Kinney AJ, Cahoon EB, Hitz WD (2002) Manipulating desaturase activities in transgenic crop plants. Biochem. Soc. Trans. 30: 1099-1103.
Cahoon EB, Ripp KG, Hall SE, McGonigle B (2002) Transgenic production of epoxy fatty acids by expression of a cytochrome P450 enzyme from Euphorbia lagascae seed. Plant Physiol. 128: 615-624.
Cahoon EB (2003) Genetic enhancement of soybean oil for industrial uses: prospects and challenges. Agbioforum 6: 11-13.
Cahoon EB, Schnurr JA, Huffman EA, Minto RE (2003) Fungal responsive fatty acid acetylenases occur widely in evolutionarily distant plant families. Plant J. 34: 671-683.
Jaworski J, Cahoon EB (2003) Industrial oils from transgenic plants. Curr. Opin. Plant Biol. 6: 178-184.
Cahoon EB, Kinney AJ (2004) Dimorphecolic acid is synthesized by the coordinate activities of two divergent Δ12-oleic acid desaturases. J Biol. Chem. 279: 12495-12502
Whittle E, Cahoon EB, Subrahmanyam S, Shanklin J (2005) A multifunctional acyl-acyl carrier protein desaturase from Hedera helix L. (English ivy) can synthesize 16- and 18-carbon monoene and diene products. J. Biol. Chem. 280: 28169-28176.
Schmidt MA, Dietrich CR, Cahoon EB (2005) Biotechnological enhancement of soybean oil for lubricant applications. In Synthetics, Mineral Oils, and Bio-Based Lubricants: Chemistry and Technology (Ed., LR Rudnick), CRC Press, Boca Raton, FL, pp. 389-397.
Cahoon EB, Kinney AJ (2005) Production of vegetable oils with novel properties: using genomic tools to probe and manipulate fatty acid metabolism. Eur. J. Lipid Sci. Technol. 107: 239-243.
Arkus K, Cahoon EB, Jez JM (2005) Kinetic characterization of wheat chlorophyllase reveals a mechanistic connection to the carboxylesterase enzyme family. Arch. Biochem. Biophys. 438: 146-155.
Schmidt MA, Tucker DM, Cahoon EB, Parrott WA (2005) Towards normalization of soybean somatic embryo maturation. Plant Cell Reports Published online April 22, 2005.
Cahoon EB, Dietrich CR, Meyer K, Damude HG, Dyer JM, Kinney AJ (2006) Conjugated fatty acids accumulate to high levels in phospholipids of metabolically engineered seeds of soybean and Arabidopsis. Phytochemistry in press.
- Paul S, Gable K, Beaudoin F, Cahoon E, Jaworski J, Napier JA, Dunn TM (2006) Members of the FAE1-like-3-ketosynthase gene family substitute for the Elop proteins of Saccharomyces cerevisiae. J. Biol. Chem. published online January 30, 2006.
Chávez, A. L.
Chávez, A.L, Sánchez, T., Jaramillo, G., Bedoya, J.M., Echeverry, J., Bolaños, E.A., Ceballos, H. and Iglesias, C.A. (2005). Variation of Quality Traits in Cassava Roots Evaluated in Landraces and Improved Clones. Euphytica 143: 125-133. [pdf]
- Chávez, A.L., Bedoya, J.M., Sánchez, T., Iglesias, C., Ceballos, H. and Roca, W. (2000) Iron, Carotene, and Ascorbic Acid in Cassava Roots and Leaves. Food and Nutrition Bulletin, Vol. 21, No. 4. [pdf]
Fauquet, C. and Taylor, N.
Fellman, J.
Bigarré L., Chazly M., Salah M., Ibrahim M., Padidam M., Nicole M., Peterschmitt M., Fauquet, C.M. and Thouvenel, J.C. (2001). Characterization of a new begomovirus from Egypt infecting hollyhock (Althea rosea). European Journal of Plant Pathology, 107: 701-711.
Chatterji, A., Beachy, R.N. and Fauquet, C.M. (2001). Expression of the oligomerization domain of the replication-associated protein (Rep) of Tomato leaf curl New Delhi virus interferes with DNA accumulation of heterologous geminiviruses. Journal of Biological Chemistry, 276: 25631-25638. JBC Online, www.jbc.org.
Dai, S., Zheng, P., Marmey, P., Zhang, S., Tian, W., Chen, S., Beachy, R.N. and Fauquet, C.M. (2001). Comparative analysis of transgenic rice plants obtained by Agrobacterium-mediated transformation and particle bombardment. Molecular Breeding, 7: 25-33.
Fauquet, C.M. and Mayo, M.A. (2001). The 7th ICTV Report. Archives of Virology, 146: 189-196.
Ndjiondjop, M.N., Brugidou, C., Zang, S., Fargette, D., Ghesquiere, A. and Fauquet, C.M. (2001). High resistance to rice yellow mottle virus in two cultivated rice cultivars is correlated with failure of cell to cell movement. Physiological and Molecular Plant Pathology, 59: 309-316.
Wu, J.D., Yang, J.B., Xu, C.W., Li, L., Xiang, T.H., Ni, D.F., Wang, X.F., Jia, S.R., Tang, Y.X., Zhang, S. and Fauquet, C.M. (2001). Study on resistance gene to Bacterial Blight Xa21 transgenic rice and their hybrid combinations. Acta Agronomica Sinica, 27: 29-34.
Brugidou, C., Opalka, N., Yeager, M., Beachy, R.N. and Fauquet, C.M. (2002). Stability of Rice yellow mottle virus and cellular compartmentalization during the infection process in Oryza sativa (L). Virology, 297: 98-108.
Fargette D, Pinel A, Halimi H, Brugidou C., Fauquet, C.M. and van Regenmortel M.H.V. (2002). Comparison of molecular and immunological typing of isolates of Rice yellow mottle virus. Archives of Virology, 147: 583-596.
Mayo, M.A., Maniloff, J., van Regenmortel, M.H.V. and Fauquet, C.M. (2002). The type species in virus taxonomy. Archives of Virology, 147: 1271-1274.
Taylor, N.J. and Fauquet, C.M. (2002). Microparticle bombardment as a tool in plant science and agricultural biotechnology. DNA and Cell Biology, 21:963-977.
van Regenmortel, M.H.V. and Fauquet, C.M. (2002). Utilisation d’un système binomial pour les noms d’espèces virales. Qu’en pense la communauté des virologues? Virologie, 6:70-73.
van Regenmortel, M.H.V. and Fauquet, C.M. (2002). Only italicised species names of viruses have a taxonomic meaning. Archives of Virology, 147: 2247-2250.
Chakraborty, S., Pandey, P.K., Banerjee, M.K., Kalloo, G. and Fauquet, C.M. (2003). A new Begomovirus species causing tomato leaf curl disease in Varanasi, India. Plant Disease, 87: 313.
Chakraborty, S., Pandey, P.K., Banerjee, M.K., Kalloo, G. and Fauquet, C.M. (2003). A new tomato leaf curl disease induced by the Tomato leaf curl Gujarat virus from Varanasi, India. Phytopathology, 93: 1485-1495.
Fauquet, C.M. and Stanley, J. (2003). Geminivirus Classification and Nomenclature: progress and problems. Annals of Applied Biology, 142: 165-189.
Fauquet, C.M., Bisaro, D.M., Briddon, R.W, Brown, J., Harrison, B.D., Rybicki, E.P., Stenger, D.C. and Stanley, J. (2003). Revision of taxonomic criteria for species demarcation in the family Geminiviridae, and an updated list of begomovirus species. Archives of Virology, 148: 405-421.
Lotrakul, P., Valverde, R.A., Clark, C.A. and Fauquet, C.M. (2003). Properties of a Begomovirus Isolated from Sweet Potato [Ipomoea batatas (L.) Lam.] Infected with Sweet potato leaf curl virus. Revista Mexicana de Fitopatología 21: 128-136.
Mansoor, S., Briddon, R.W., Bull, S.E., Bedford, I.D., Bashir, A., Hussain, M., Saeed, M., Zafar, Y., Malik, A., Fauquet, C.M. and Markham, P.G.. (2003). Cotton leaf curl disease is associated with multiple monopartite begomoviruses supported by single DNA beta. Archives of Virology 148: 1969-1986.
Mayo, M.A., Fauquet, C.M. and Maniloff, J. (2003). Taxonomic proposals on the eb: New ICTV consultative procedures. Archives of Virology, 148: 609-611.
Méndez-Lozano, J., Torres-Pacheco, I., Fauquet, C.M., Rivera-Bustamente, R.F. (2003). Interactions between Geminiviruses in a naturally occurring mixture: Pepper huasteco virus and Pepper golden mosaic virus. Phytopathology, 93: 270-277.
Vanitharani R., Chellappan P. and Fauquet, C.M. (2003). siRNA-mediated interference of gene expression and viral DNA accumulation in cultured plant cells. PNAS, 100: 9632-9636. Published online July 28, 2003, 10.1073/pnas.1733874100.
Zhou, X., Xie, Y., Tao, X., Zhang, Z., Li, Z. and Fauquet, C.M. (2003). Characterization of DNA-beta associated with begomoviruses in China and evidence for co-evolution with their cognate viral DNA-A. Journal of General Virology, 84: 237-247.
Adams, M.J., Antoniw, J.F., Bar-Joseph, M., Brunt, A.A., Candresse, T., Foster, G.D., Martelli, G.P., Milne, R.G. and Fauquet, C.M. (2004). The new plant virus family Flexiviridae and assessment of molecular criteria for species demarcation. Archives of Virology 149: 1045-1060.
Berry, S.D., Fondong, V.N., Rey, C., Rogan, D., Fauquet, C.M., Brown, J.K. (2004). Molecular evidence for five distinct Bemisia tabaci (Homoptera: Aleyrodidae) geographic haplotypes associated with cassava plants in sub-Saharan Africa. Annals of the Entomological Society of America. 97: 852-859.
Chellappan, P., Vanitharani, R. and Fauquet, C.M. (2004). Short interfering RNA accumulation correlates with host recovery in DNA virus infected hosts and gene silencing targets specific viral sequences. Journal of Virology. 78: 7465-7477.
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